Examples

This section provides examples demonstrating how to run the DOLPHIN model, perform differential exon (or junction) analysis, and interpret the resulting alternative splicing outcomes.

• Case Study 1: Full-length Dataset
• Case Study 2: 10X Colon Dataset
• Case Study 3: EDEG/JDEG Analysis Using the PDAC Dataset
• Exon-Level Feature Matrix Analysis with SCANPY
• Junction Reads (Adjacency Matrix) Analysis with SCANPY