DOLPHIN

Getting started with DOLPHIN:

  • Usage
  • Tutorials
    • Exon GTF Generation
    • Preprocessing Full-Length Single-Cell RNA-Seq for Exon and Junction Read Counts
    • Preprocessing 10X Single-Cell RNA-Seq for Exon and Junction Read Counts
    • Generate Feature Matrix and Adjacency Matrix
    • Setup and Train the DOLPHIN Model
    • Cell Aggregation
    • Alternative Splicing Events Detection
    • Alternative Splicing Analysis
    • Exon-Level Differential Gene Analysis (EDEG)
    • Step 2: Identify Gene-Level Markers Using Exon-Level Information
    • Junction-Level Differential Gene Analysis (JDEG)
  • Examples
  • API Documentations
DOLPHIN
  • Tutorials
  • View page source

Tutorials

This section contains step-by-step tutorials for using the DOLPHIN tool.

  • Exon GTF Generation
  • Preprocessing Full-Length Single-Cell RNA-Seq for Exon and Junction Read Counts
  • Preprocessing 10X Single-Cell RNA-Seq for Exon and Junction Read Counts
  • Generate Feature Matrix and Adjacency Matrix
  • Setup and Train the DOLPHIN Model
  • Cell Aggregation
  • Alternative Splicing Events Detection
  • Alternative Splicing Analysis
  • Exon-Level Differential Gene Analysis (EDEG)
  • Step 2: Identify Gene-Level Markers Using Exon-Level Information
  • Junction-Level Differential Gene Analysis (JDEG)
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